Overview

Students should watch Udacity course videos according to the following schedule. It is recommended for students to do lab sessions on the schedule by yourself as early as possible since some of homework may cover the lab materials scheduled later than the homework.

Schedule

Week # Dates In-class lesson Video lessons Lab Deliverable Due
1 1/9/2018 Intro to the BDH class 1. Intro to Big Data Analytics
1 1/11/2018 Sunlab's research by Jimeng Sun 2. Course Overview Scala Basic
2 1/16/2018 Deep learning for healthcare by Edward Choi 3. Predictive Modeling
2 1/18/2018 Guest lecture by Mark Braunstein
3 1/23/2018 Deep learning for healthcare by Edward Choi - Cont. 4.MapReduce& HBase HW1 (1/21/2018)
3 1/25/2018 Hadoop & HDFS Basics
4 1/30/2018 Guest lecture by Chunhua Wen (Columbia) 5.Classification evaluation metrics
4 2/1/2018 6.Classification ensemble methods Hadoop Pig & Hive
5 2/6/2018 Guest lecture by Jon Duke 7. Phenotyping
5 2/8/2018 8. Clustering "Spark Basic, Spark SQL " HW2 (2/11/2018)
6 2/13/2018 Guest lecture by Rachel Patzer (Emory) 9. Spark
6 2/15/2018 Spark Application & Spark MLlib
7 2/20/2018 Computational phenotyping with tensor factorization by Kimis Perros (I) 10. Medical ontology
7 2/22/2018 NLP Lab by Charity Hilton HW3 (2/25/2018)
8 2/27/2018 Guest lecture by David Page (UW Madison) 11. Graph analysis
8 3/1/2018 Spark GraphX Project Group Formation (3/1/2018)
9 3/6/2018 Guest lecture by Jim Rehg 12. Dimensionality Reduction
9 3/8/2018 Deep Learning Lab by Sungtae An Project Proposal (3/11/2018)
10 3/13/2018 13. Patient similairty Deep Learning Lab by Sungtae An - Cont.
10 3/15/2018 HW4 (3/18/2018)
11 3/20/2018 Spring break
11 3/22/2018 Spring break
12 3/27/2018 Project Discussion Peer Review Bidding (3/27/2018)
12 3/29/2018 Project Discussion Project Draft (4/1/2018)
13 4/3/2018 Computational phenotyping with tensor factorization by Kimis Perros - Cont.
13 4/5/2018 Guest lecture by Greg Cooper (UPitt) Peer Review on Draft (4/8/2018)
14 4/10/2018 Guest
14 4/12/2018 Guest lecture: S. Joshua Swamidass (Wash U.)
15 4/17/2018
15 4/19/2018 Guest lecture by Walter “Buzz” Stewart (Sutter Health)
16 4/24/2018
16 4/26/2018 Final Project with code, presentation, and the final paper (4/24/2018)

Previous Guest Lectures

See RESOURCE section.