Journals

  1. Choi, Edward, Andy Schuetz, Walter F Stewart, and Jimeng Sun "Using recurrent neural network models for early detection of heart failure onset" Journal of the American Medical Informatics Association 2016; doi: 10.1093/jamia/ocw112
  2. RL Richesson, Jimeng Sun, J Pathak, AN Kho, and JC Denny, A survey of clinical phenotyping in selected national networks: demonstrating the need for high-throughput, portable, and computational methods, Artificial Intelligence in Medicine 71, 57-61
  3. K Malhotra, SB Navathe, DH Chau, C Hadjipanayis, and Jimeng Sun, “Constraint based temporal event sequence mining for Glioblastoma survival prediction”, Journal of biomedical informatics 61, 267-275
  4. Han, Dong, Shuang Wang, Chao Jiang, Xiaoqian Jiang, Hyeon-Eui Kim, Jimeng Sun, and Lucila Ohno-Machado. “Trends in Biomedical Informatics: Automated Topic Analysis of JAMIA Articles.” Journal of the American Medical Informatics Association: JAMIA 22, no. 6 (November 2015): 1153–63. doi:10.1093/jamia/ocv157.
  5. Basole, Rahul C., Mark L. Braunstein, and Jimeng Sun. “Data and Analytics Challenges for a Learning Healthcare System.” J. Data and Information Quality 6, no. 2–3 (2015): 10. doi:10.1145/2755489.
  6. Chen, You, Joydeep Ghosh, Cosmin Adrian Bejan, Carl A. Gunter, Siddharth Gupta, Abel N. Kho, David M. Liebovitz, Jimeng Sun, Joshua C. Denny, and Bradley Malin. “Building Bridges across Electronic Health Record Systems through Inferred Phenotypic Topics.” Journal of Biomedical Informatics 55 (2015): 82–93. doi:10.1016/j.jbi.2015.03.011.
  7. Wang, Fei, and Jimeng Sun. “PSF: A Unified Patient Similarity Evaluation Framework Through Metric Learning With Weak Supervision.” IEEE J. Biomedical and Health Informatics 19, no. 3 (2015): 1053–60. doi:10.1109/JBHI.2015.2425365.
  8. Wang, Fei, and Jimeng Sun. “Survey on Distance Metric Learning and Dimensionality Reduction in Data Mining.” Data Min. Knowl. Discov. 29, no. 2 (2015): 534–64. doi:10.1007/s10618-014-0356-z. 
  9. Ho, Joyce C., Joydeep Ghosh, Steve R. Steinhubl, Walter F. Stewart, Joshua C. Denny, Bradley A. Malin, and Jimeng Sun. “Limestone: High-Throughput Candidate Phenotype Generation via Tensor Factorization.” Journal of Biomedical Informatics. Accessed August 8, 2014. doi:10.1016/j.jbi.2014.07.001.
  10. Gkoulalas-Divanis, Aris, Grigorios Loukides, and Jimeng Sun. “Publishing Data from Electronic Health Records While Preserving Privacy: A Survey of Algorithms.” Journal of Biomedical Informatics, June 14, 2014. doi:10.1016/j.jbi.2014.06.002.
  11. Gkoulalas-Divanis, Aris, Grigorios Loukides, and Jimeng Sun. “Toward Smarter Healthcare: Anonymizing Medical Data to Support Research Studies.” IBM Journal of Research and Development 58, no. 1 (2014). doi:10.1147/JRD.2013.2288173
  12. Ng, Kenney, Amol Ghoting, Steven R. Steinhubl, Walter F. Stewart, Bradley Malin, and Jimeng Sun. “PARAMO: A PARAllel Predictive MOdeling Platform for Healthcare Analytic Research Using Electronic Health Records.” Journal of Biomedical Informatics 48 (April 2014): 160–70. doi:10.1016/j.jbi.2013.12.012
  13. Sun, Jimeng, Candace D. McNaughton, Ping Zhang, Adam Perer, Aris Gkoulalas-Divanis, Joshua C. Denny, Jacqueline Kirby, Thomas Lasko, Alexander Saip, and Bradley A. Malin. “Predicting Changes in Hypertension Control Using Electronic Health Records from a Chronic Disease Management Program.” Journal of the American Medical Informatics Association: JAMIA 21, no. 2 (April 2014): 337–44. doi:10.1136/amiajnl-2013-002033.
  14. Vijayakrishnan, Rajakrishnan, Steven R. Steinhubl, Kenney Ng, Jimeng Sun, Roy J. Byrd, Zahra Daar, Brent A. Williams, null Christopher Defilippi, Shahram Ebadollahi, and Walter F. Stewart. “Prevalence of Heart Failure Signs and Symptoms in a Large Primary Care Population Identified Through the Use of Text and Data Mining of the Electronic Health Record.” Journal of Cardiac Failure, April 4, 2014. doi:10.1016/j.cardfail.2014.03.008
    • Editorial on this paper: " One provocative finding was that paroxysmal nocturnal dyspnea was present in 41% of patients ultimately diagnosed with heart failure and was noted almost 2 years before a heart failure diagnosis was made"
  15. Byrd, Roy J., Steven R. Steinhubl, Jimeng Sun, Shahram Ebadollahi, and Walter F. Stewart. “Automatic Identification of Heart Failure Diagnostic Criteria, Using Text Analysis of Clinical Notes from Electronic Health Records.” International Journal of Medical Informatics, January 10, 2013. doi:10.1016/j.ijmedinf.2012.12.005.
  16. Wang, Fei, Noah Lee, Jianying Hu, Jimeng Sun, Shahram Ebadollahi, and Andrew F. Laine. “A Framework for Mining Signatures from Event Sequences and Its Applications in Healthcare Data.” IEEE Transactions on Pattern Analysis and Machine Intelligence 35, no. 2 (February 2013): 272–85. doi:10.1109/TPAMI.2012.111.
  17. Gotz, David, Jimeng Sun, and Nan Cao. “Multifaceted Visual Analytics for Healthcare Applications.” IBM Journal of Research and Development 56, no. 5 (2012): 6. doi:10.1147/JRD.2012.2199170.
  18. Kang, U., Hanghang Tong, Jimeng Sun, Ching-Yung Lin, and Christos Faloutsos. “Gbase: An Efficient Analysis Platform for Large Graphs.” VLDB J. 21, no. 5 (2012): 637–50. doi:10.1007/s00778-012-0283-9.
  19. Markatou, Marianthi, Prabani Kuruppumullage Don, Jianying Hu, Fei Wang, Jimeng Sun, Robert Sorrentino, and Shahram Ebadollahi. “Case-Based Reasoning in Comparative Effectiveness Research.” IBM Journal of Research and Development 56, no. 5 (2012): 4. doi:10.1147/JRD.2012.2198311.
  20. Sondhi, Parikshit, Jimeng Sun, ChengXiang Zhai, Robert Sorrentino, and Martin S. Kohn. “Leveraging Medical Thesauri and Physician Feedback for Improving Medical Literature Retrieval for Case Queries.” Journal of the American Medical Informatics Association: JAMIA 19, no. 5 (October 2012): 851–58. doi:10.1136/amiajnl-2011-000293.
  21. Sow, Daby M., Jimeng Sun, Alain Biem, Jianying Hu, Marion Blount, and Shahram Ebadollahi. “Real-Time Analysis for Short-Term Prognosis in Intensive Care.” IBM Journal of Research and Development 56, no. 5 (2012): 3. doi:10.1147/JRD.2012.2197952.
  22. Sun, Jimeng, Fei Wang, Jianying Hu, and Shahram Edabollahi. “Supervised Patient Similarity Measure of Heterogeneous Patient Records.” SIGKDD Explorations 14, no. 1 (2012): 16–24. http://sigkdd.org/sites/default/files/issues/V14-01-03-Sun.pdf
  23. Tang, Jie, Yuan Zhang, Jimeng Sun, Jinghai Rao, Wenjing Yu, Yiran Chen, and Alvis Cheuk M. Fong. “Quantitative Study of Individual Emotional States in Social Networks.” T. Affective Computing 3, no. 2 (2012): 132–44.
  24. Wang, Fei, Jimeng Sun, and Shahram Ebadollahi. “Composite Distance Metric Integration by Leveraging Multiple Experts’ Inputs and Its Application in Patient Similarity Assessment.” Statistical Analysis and Data Mining 5, no. 1 (2012): 54–69. doi:10.1002/sam.11135
  25. Cao, Nan, David Gotz, Jimeng Sun, and Huamin Qu. “DICON: Interactive Visual Analysis of Multidimensional Clusters.” IEEE Transactions on Visualization and Computer Graphics 17, no. 12 (December 2011): 2581–90. doi:10.1109/TVCG.2011.188.
  26. Lin, Yu-Ru, Jimeng Sun, Hari Sundaram, Aisling Kelliher, Paul Castro, and Ravi B. Konuru. “Community Discovery via Metagraph Factorization.” TKDD 5, no. 3 (2011): 17. doi:10.1145/1993077.1993081
  27. Cao, Nan, Jimeng Sun, Yu-Ru Lin, David Gotz, Shixia Liu, and Huamin Qu. “FacetAtlas: Multifaceted Visualization for Rich Text Corpora.” IEEE Transactions on Visualization and Computer Graphics 16, no. 6 (December 2010): 1172–81. doi:10.1109/TVCG.2010.154.
  28. Cao, Nan, Jimeng Sun, Yu-Ru Lin, David Gotz, Shixia Liu, and Huamin Qu. “FacetAtlas: Multifaceted Visualization for Rich Text Corpora.” IEEE Transactions on Visualization and Computer Graphics 16, no. 6 (December 2010): 1172–81. doi:10.1109/TVCG.2010.154.
  29. Khan, Asheq, Hani Jamjoom, and Jimeng Sun. “AIM-HI: A Framework for Request Routing in Large-Scale IT Global Service Delivery.” IBM Journal of Research and Development 53, no. 6 (2009): 4. doi:10.1147/JRD.2009.5429032.
  30. Sun, Jimeng. “Incremental Pattern Discovery on Streams, Graphs and Tensors.” SIGKDD Explorations 10, no. 2 (2008): 28–29.
  31. Sun, Jimeng, Dacheng Tao, Spiros Papadimitriou, Philip S. Yu, and Christos Faloutsos. “Incremental Tensor Analysis: Theory and Applications.” TKDD 2, no. 3 (2008). http://doi.acm.org/10.1145/1409620.1409621.
  32. Sun, Jimeng, Charalampos E. Tsourakakis, Evan Hoke, Christos Faloutsos, and Tina Eliassi-Rad. “Two Heads Better than One: Pattern Discovery in Time-Evolving Multi-Aspect Data.” Data Min. Knowl. Discov. 17, no. 1 (2008): 111–28. doi:10.1007/s10618-008-0112-3.
  33. Sun, Jimeng, Yinglian Xie, Hui Zhang, and Christos Faloutsos. “Less Is More: Sparse Graph Mining with Compact Matrix Decomposition.” Statistical Analysis and Data Mining 1, no. 1 (2008): 6–22. doi:10.1002/sam.102.
  34. Tao, Dacheng, Mingli Song, Xuelong Li, Jialie Shen, Jimeng Sun, Xindong Wu, Christos Faloutsos, and Stephen J. Maybank. “Bayesian Tensor Approach for 3-D Face Modeling.” IEEE Trans. Circuits Syst. Video Techn. 18, no. 10 (2008): 1397–1410. doi:10.1109/TCSVT.2008.2002825.
  35. Hoke, Evan, Jimeng Sun, John D. Strunk, Gregory R. Ganger, and Christos Faloutsos. “InteMon: Continuous Mining of Sensor Data in Large-Scale Self-Infrastructures.” Operating Systems Review 40, no. 3 (2006): 38–44.
  36. Sun, Jimeng, Yufei Tao, Dimitris Papadias, and George Kollios. “Spatio-Temporal Join Selectivity.” Inf. Syst. 31, no. 8 (2006): 793–813. doi:10.1016/j.is.2005.02.002.
  37. Sun, Jimeng, Huiming Qu, Deepayan Chakrabarti, and Christos Faloutsos. “Relevance Search and Anomaly Detection in Bipartite Graphs.” SIGKDD Explorations 7, no. 2 (2005): 48–55.
  38. Tao, Yufei, Jimeng Sun, and Dimitris Papadias. “Analysis of Predictive Spatio-Temporal Queries.” ACM Trans. Database Syst. 28, no. 4 (2003): 295–336.
  39. Papadias, Dimitris, Yufei Tao, Jun Zhang, Nikos Mamoulis, Qiongmao Shen, and Jimeng Sun. “Indexing and Retrieval of Historical Aggregate Information about Moving Objects.” IEEE Data Eng. Bull. 25, no. 2 (2002): 10–17.

Conferences

  1. Choi, Edward, Mohammad Taha Bahadori, Andy Schuetz, Walter F. Stewart, and Jimeng Sun. 2016. “RETAIN: Interpretable Predictive Model in Healthcare Using Reverse Time Attention Mechanism.” NIPS’16 or at arXiv [cs.LG]. arXiv. http://arxiv.org/abs/1608.05745.
  2. Yin, Zhijun, You Chen, Daniel Fabbri, Jimeng Sun, and Bradley Malin. 2016. “#PrayForDad: Learning the Semantics Behind Why Social Media Users Disclose Health Information.” In Tenth International AAAI Conference on Web and Social Media. (ICWSM) 456-465 http://www.aaai.org/ocs/index.php/ICWSM/ICWSM16/paper/viewPaper/13085.
  3. Edward Choi, Mohammad Bahadori, Elizabeth Searles, Catherine Coffey, Michael Thompson, James Bost, Javier Tejedor-Sojo,and Jimeng Sun. “Multi-layer Representation Learning for Medical Concepts” KDD 16.
  4. Yuyu Zhang, Mohammad Bahadori, Hang Su, and Jimeng Sun, “FLASH: Fast Bayesian Optimization for Data Analytic Pipelines”, KDD 16
  5. Edward Choi, Mohammad Taha Bahadori, Andy Schuetz, Walter F. Stewart, and Jimeng Sun, "Doctor AI: Predicting Clinical Events via Recurrent Neural Networks", Machine learning for Healthcare 2016, arXiv:1511.05942 [cs.LG]
  6. Zhaoming Wu, Charu C Aggarwal, Jimeng Sun, “The Troll-Trust Model for Ranking in Signed Networks”, Proceedings of the Ninth ACM International Conference on Web Search and Data Mining, 447-456, 2016
  7. Ioakeim Perros, Robert Chen, Richard W. Vuduc, Jimeng Sun: Sparse Hierarchical Tucker Factorization and Its Application to Healthcare. ICDM 2015: 943-948
  8. Khalilia, Mohammed, Myung Choi, Amelia Henderson, Sneha Iyengar, Mark L. Braunstein and Jimeng Sun. Clinical Predictive Modeling Development and Deployment through FHIR Web Services, AMIA 2015
  9. Chen, Robert, Hang Su, Yi Zhen, Mohammed Khalilia, Daniel Hirsch, Michael Thompson, Tod Davis, Yue Peng, Sizhe Lin, Javier Tejedor-Sojo, Elizabeth Searles  and Jimeng Sun. Cloud-based Predictive Modeling System and its Application to Asthma Readmission Prediction, AMIA 2015
  10. Li, Jiajia, Casey Battaglino, Ioakeim Perros, Jimeng Sun, and Richard W. Vuduc. “An Input-Adaptive and in-Place Approach to Dense Tensor-Times-Matrix Multiply.” In Proceedings of the International Conference for High Performance Computing, Networking, Storage and Analysis, SC 2015, Austin, TX, USA, November 15-20, 2015, edited by Jackie Kern and Jeffrey S. Vetter, 76:1–76:12. ACM, 2015. doi:10.1145/2807591.2807671.
  11. Ng, Kenney, Jimeng Sun, Jianying Hu, and Fei Wang. “Personalized Predictive Modeling and Risk Factor Identification Using Patient Similarity.” AMIA Joint Summits on Translational Science Proceedings AMIA Summit on Translational Science 2015 (2015): 132–36.
  12. Wang, Yichen, Robert Chen, Joydeep Ghosh, Joshua C. Denny, Abel Kho, You Chen, Bradley A. Malin, and Jimeng Sun. “Rubik: Knowledge Guided Tensor Factorization and Completion for Health Data Analytics.” In Proceedings of the 21th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining. KDD ’15. ACM, 2015.
  13. Joyce Ho, Joydeep Ghosh, Jimeng Sun. Marble: High-throughput Phenotyping from Electronic Health Records via Sparse Nonnegative Tensor Factorization. ACM SIGKDD, 2014
  14. Jiayu Zhou, Yashu Liu, Jimeng Sun, Hu, Jianying, and Jieping Ye. “Patient Risk Prediction Model via Top-K Stability Selection.” In Proceedings of the 13th SIAM International Conference on Data Mining, May 2-4, 2013. Austin, Texas, USA, 55–63. SIAM, 2013. doi:10.1137/1.9781611972832.7.
  15. Tang, Jie, Sen Wu, and Jimeng Sun. “Confluence: Conformity Influence in Large Social Networks.” In The 19th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, KDD 2013, Chicago, IL, USA, August 11-14, 2013, 347–55. ACM, 2013. http://doi.acm.org/10.1145/2487575.2487691.
  16. Wu, Sen, Jimeng Sun, and Jie Tang. “Patent Partner Recommendation in Enterprise Social Networks.” In Sixth ACM International Conference on Web Search and Data Mining, WSDM 2013, Rome, Italy, February 4-8, 2013, 43–52. ACM, 2013. http://doi.acm.org/10.1145/2433396.2433404.
  17. Zhou, Jiayu, Zhaosong Lu, Jimeng Sun, Lei Yuan, Fei Wang, and Jieping Ye. “FeaFiner: Biomarker Identification from Medical Data through Feature Generalization and Selection.” In The 19th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, KDD 2013, Chicago, IL, USA, August 11-14, 2013, 1034–42. ACM, 2013. http://doi.acm.org/10.1145/2487575.2487671.
  18. Gotz, David, Harry Stavropoulos, Jimeng Sun, and Fei Wang. “ICDA: A Platform for Intelligent Care Delivery Analytics.” AMIA (2012): 264–73.
  19. Hu, Jianying, Fei Wang, Jimeng Sun, Robert Sorrentino, and Shahram Ebadollahi. “A Healthcare Utilization Analysis Framework for Hot Spotting and Contextual Anomaly Detection.” 2012 (2012): 360–69.
  20. Kang, U., Hanghang Tong, and Jimeng Sun. “Fast Random Walk Graph Kernel.” In Proceedings of the Twelfth SIAM International Conference on Data Mining, Anaheim, California, USA, April 26-28, 2012, 828–38. SIAM / Omnipress, 2012. doi:10.1137/1.9781611972825.71.
  21. Luo, Dijun, Fei Wang, Jimeng Sun, Marianthi Markatou, Jianying Hu, and Shahram Ebadollahi. “SOR: Scalable Orthogonal Regression for Low-Redundancy Feature Selection and Its Healthcare Applications.” In Proceedings of the Twelfth SIAM International Conference on Data Mining, Anaheim, California, USA, April 26-28, 2012, 576–87. SIAM / Omnipress, 2012. doi:10.1137/1.9781611972825.50.
  22. Miao, Gengxin, Ziyu Guan, Louise E. Moser, Xifeng Yan, Shu Tao, Nikos Anerousis, and Jimeng Sun. “Latent Association Analysis of Document Pairs.” In The 18th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, KDD ’12, Beijing, China, August 12-16, 2012, edited by Qiang Yang, Deepak Agarwal, and Jian Pei, 1415–23. ACM, 2012. http://doi.acm.org/10.1145/2339530.2339752.
  23. Perer, Adam, and Jimeng Sun. “MatrixFlow: Temporal Network Visual Analytics to Track Symptom Evolution during Disease Progression.” AMIA 2012 (2012): 716–25.
  24. Sondhi, Parikshit, Jimeng Sun, Hanghang Tong, and ChengXiang Zhai. “SympGraph: A Framework for Mining Clinical Notes through Symptom Relation Graphs.” In The 18th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, KDD ’12, Beijing, China, August 12-16, 2012, , 1167–75. ACM, 2012. http://doi.acm.org/10.1145/2339530.2339712.
  25. Sun, Jimeng, Jianying Hu, Dijun Luo, Marianthi Markatou, Fei Wang, Shahram Edabollahi, Steven E. Steinhubl, Zahra Daar, and Walter F. Stewart. “Combining Knowledge and Data Driven Insights for Identifying Risk Factors Using Electronic Health Records.” AMIA 2012 (2012): 901–10.
  26. Tang, Jie, Sen Wu, Jimeng Sun, and Hang Su. “Cross-Domain Collaboration Recommendation.” In The 18th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, KDD ’12, Beijing, China, August 12-16, 2012, 1285–93. ACM, 2012. http://doi.acm.org/10.1145/2339530.2339730.
  27. Wang, Fei, Jianying Hu, and Jimeng Sun. “Medical Prognosis Based on Patient Similarity and Expert Feedback.” In Proceedings of the 21st International Conference on Pattern Recognition, ICPR 2012, Tsukuba, Japan, November 11-15, 2012, 1799–1802. IEEE, 2012. http://ieeexplore.ieee.org/xpl/freeabs_all.jsp?arnumber=6460501.
  28. Wang, Fei, Noah Lee, Jianying Hu, Jimeng Sun, and Shahram Ebadollahi. “Towards Heterogeneous Temporal Clinical Event Pattern Discovery: A Convolutional Approach.” In The 18th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, KDD ’12, Beijing, China, August 12-16, 2012, 453–61. ACM, 2012. http://doi.acm.org/10.1145/2339530.2339605.
  29. Cao, Nan, David Gotz, Jimeng Sun, Yu-Ru Lin, and Huamin Qu. “SolarMap: Multifaceted Visual Analytics for Topic Exploration.” In 11th IEEE International Conference on Data Mining, ICDM 2011, Vancouver, BC, Canada, December 11-14, 2011, 101–10. IEEE, 2011. http://doi.ieeecomputersociety.org/10.1109/ICDM.2011.135.
  30. Gotz, David, Jimeng Sun, Nan Cao, and Shahram Ebadollahi. “Visual Cluster Analysis in Support of Clinical Decision Intelligence.” AMIA 2011 (2011): 481–90.
  31. Kang, U., Spiros Papadimitriou, Jimeng Sun, and Hanghang Tong. “Centralities in Large Networks: Algorithms and Observations.” In Proceedings of the Eleventh SIAM International Conference on Data Mining, SDM 2011, April 28-30, 2011, Mesa, Arizona, USA, 119–30. SIAM / Omnipress, 2011. doi:10.1137/1.9781611972818.11.
  32. Kang, U., Hanghang Tong, Jimeng Sun, Ching-Yung Lin, and Christos Faloutsos. “GBASE: A Scalable and General Graph Management System.” In Proceedings of the 17th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, San Diego, CA, USA, August 21-24, 2011, 1091–99. ACM, 2011. http://doi.acm.org/10.1145/2020408.2020580.
  33. Lee, Noah, Andrew F. Laine, Jianying Hu, Fei Wang, Jimeng Sun, and Shahram Ebadollahi. “Mining Electronic Medical Records to Explore the Linkage between Healthcare Resource Utilization and Disease Severity in Diabetic Patients.” In 2011 IEEE International Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2011, San Jose, CA, USA, July 26-29, 2011, 250–57. IEEE, 2011. http://doi.ieeecomputersociety.org/10.1109/HISB.2011.34.
  34. Wang, Chi, Jie Tang, Jimeng Sun, and Jiawei Han. “Dynamic Social Influence Analysis through Time-Dependent Factor Graphs.” In International Conference on Advances in Social Networks Analysis and Mining, ASONAM 2011, Kaohsiung, Taiwan, 25-27 July 2011, 239–46. IEEE Computer Society, 2011. doi:10.1109/ASONAM.2011.116.
  35. Wang, Fei, Noah Lee, Jimeng Sun, Jianying Hu, and Shahram Ebadollahi. “Automatic Group Sparse Coding.” In Proceedings of the Twenty-Fifth AAAI Conference on Artificial Intelligence, AAAI 2011, San Francisco, California, USA, August 7-11, 2011. http://www.aaai.org/ocs/index.php/AAAI/AAAI11/paper/view/3717.
  36. Wang, Fei, Jimeng Sun, and Shahram Ebadollahi. “Integrating Distance Metrics Learned from Multiple Experts and Its Application in Inter-Patient Similarity Assessment.” In Proceedings of the Eleventh SIAM International Conference on Data Mining, SDM 2011, April 28-30, 2011, Mesa, Arizona, USA, 59–70. SIAM / Omnipress, 2011. doi:10.1137/1.9781611972818.6.
  37. Wang, Fei, Jimeng Sun, Jianying Hu, and Shahram Ebadollahi. “iMet: Interactive Metric Learning in Healthcare Applications.” In Proceedings of the Eleventh SIAM International Conference on Data Mining, SDM 2011, April 28-30, 2011, Mesa, Arizona, USA, 944–55. SIAM / Omnipress, 2011. doi:10.1137/1.9781611972818.81.
  38. Ebadollahi, Shahram, Jimeng Sun, David Gotz, Jianying Hu, Daby Sow, and Chalapathy Neti. “Predicting Patient’s Trajectory of Physiological Data Using Temporal Trends in Similar Patients: A System for Near-Term Prognostics.” AMIA 2010 (2010): 192–96.
  39. Lin, Yu-Ru, Jimeng Sun, Nan Cao, and Shixia Liu. “ContexTour: Contextual Contour Analysis on Dynamic Multi-Relational Clustering.” In Proceedings of the SIAM International Conference on Data Mining, SDM 2010, April 29 - May 1, 2010, Columbus, Ohio, USA, 418–29. SIAM, 2010. doi:10.1137/1.9781611972801.37.
  40. Sondhi, Parikshit, Jimeng Sun, ChengXiang Zhai, Robert Sorrentino, Martin S. Kohn, Shahram Ebadollahi, and Yanen Li. “Medical Case-Based Retrieval by Leveraging Medical Ontology and Physician Feedback: UIUC-IBM at ImageCLEF 2010.” In CLEF 2010 LABs and Workshops, Notebook Papers, 22-23 September 2010, Padua, Italy, 2010. http://www.clef-initiative.eu/documents/71612/86374/CLEF2010wn-ImageCLEF-SondhiEt2010.pdf.
  41. Sow, Daby, Alain Biem, Jimeng Sun, Jianying Hu, and Shahram Ebadollahi. “Real-Time Prognosis of ICU Physiological Data Streams.” Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2010 (2010): 6785–88. doi:10.1109/IEMBS.2010.5625983.
  42. Sun, Jimeng, David Gotz, and Nan Cao. “DiseaseAtlas: Multi-Facet Visual Analytics for Online Disease Articles.” Conference Proceedings: ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference 2010 (2010): 1123–26. doi:10.1109/IEMBS.2010.5627103.
  43. Sun, Jimeng, Daby M. Sow, Jianying Hu, and Shahram Ebadollahi. “A System for Mining Temporal Physiological Data Streams for Advanced Prognostic Decision Support.” In ICDM 2010, The 10th IEEE International Conference on Data Mining, Sydney, Australia, 14-17 December 2010, 1061–66. IEEE Computer Society, 2010. http://doi.ieeecomputersociety.org/10.1109/ICDM.2010.102.
  44. Sun, Jimeng, Daby M. Sow, Jianying Hu, and Shahram Ebadollahi. “Localized Supervised Metric Learning on Temporal Physiological Data.” In 20th International Conference on Pattern Recognition, ICPR 2010, Istanbul, Turkey, 23-26 August 2010, 4149–52. IEEE, 2010. doi:10.1109/ICPR.2010.1009.
  45. Tan, Chenhao, Jie Tang, Jimeng Sun, Quan Lin, and Fengjiao Wang. “Social Action Tracking via Noise Tolerant Time-Varying Factor Graphs.” In Proceedings of the 16th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, Washington, DC, USA, July 25-28, 2010, 1049–58. ACM, 2010. http://doi.acm.org/10.1145/1835804.1835936.
  46. Xiang, Liang, Quan Yuan, Shiwan Zhao, Li Chen, Xiatian Zhang, Qing Yang, and Jimeng Sun. “Temporal Recommendation on Graphs via Long- and Short-Term Preference Fusion.” In Proceedings of the 16th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, Washington, DC, USA, July 25-28, 2010, 723–32. ACM, 2010. http://doi.acm.org/10.1145/1835804.1835896.
  47. Zhang, Duo, Jimeng Sun, ChengXiang Zhai, Abhijit Bose, and Nikos Anerousis. “PTM: Probabilistic Topic Mapping Model for Mining Parallel Document Collections.” In Proceedings of the 19th ACM Conference on Information and Knowledge Management, CIKM 2010, Toronto, Ontario, Canada, October 26-30, 2010, 1653–56. ACM, 2010. http://doi.acm.org/10.1145/1871437.1871696.
  48. Zhang, Yuan, Jie Tang, Jimeng Sun, Yiran Chen, and Jinghai Rao. “MoodCast: Emotion Prediction via Dynamic Continuous Factor Graph Model.” In ICDM 2010, The 10th IEEE International Conference on Data Mining, Sydney, Australia, 14-17 December 2010, 1193–98. IEEE Computer Society, 2010. http://doi.ieeecomputersociety.org/10.1109/ICDM.2010.105.
  49. Lin, Ching-Yung, Nan Cao, Shixia Liu, Spiros Papadimitriou, Jimeng Sun, and Xifeng Yan. “SmallBlue: Social Network Analysis for Expertise Search and Collective Intelligence.” In Proceedings of the 25th International Conference on Data Engineering, ICDE 2009, March 29 2009 - April 2 2009, Shanghai, China, 1483–86. IEEE, 2009. http://doi.ieeecomputersociety.org/10.1109/ICDE.2009.140.
  50. Lin, Yu-Ru, Jimeng Sun, Paul Castro, Ravi B. Konuru, Hari Sundaram, and Aisling Kelliher. “Extracting Community Structure through Relational Hypergraphs.” In Proceedings of the 18th International Conference on World Wide Web, WWW 2009, Madrid, Spain, April 20-24, 2009, 1213–14. ACM, 2009. http://doi.acm.org/10.1145/1526709.1526934.
  51. Lin, Yu-Ru, Jimeng Sun, Paul Castro, Ravi B. Konuru, Hari Sundaram, and Aisling Kelliher. “MetaFac: Community Discovery via Relational Hypergraph Factorization.” In Proceedings of the 15th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, Paris, France, June 28 - July 1, 2009, 527–36. ACM, 2009. http://doi.acm.org/10.1145/1557019.1557080.
  52. Shi, Lei, Nan Cao, Shixia Liu, Weihong Qian, Li Tan, Guodong Wang, Jimeng Sun, and Ching-Yung Lin. “HiMap: Adaptive Visualization of Large-Scale Online Social Networks.” In IEEE Pacific Visualization Symposium PacificVis 2009, Beijing, China, April 20-23, 2009, 41–48. IEEE Computer Society, 2009. http://doi.ieeecomputersociety.org/10.1109/PACIFICVIS.2009.4906836.
  53. Sun, Jimeng, Spiros Papadimitriou, Ching-Yung Lin, Nan Cao, Shixia Liu, and Weihong Qian. “MultiVis: Content-Based Social Network Exploration through Multi-Way Visual Analysis.” In Proceedings of the SIAM International Conference on Data Mining, SDM 2009, April 30 - May 2, 2009, Sparks, Nevada, USA, 1064–75. SIAM, 2009. doi:10.1137/1.9781611972795.91.
  54. Tang, Jie, Jimeng Sun, Chi Wang, and Zi Yang. “Social Influence Analysis in Large-Scale Networks.” In Proceedings of the 15th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, Paris, France, June 28 - July 1, 2009, 807–16. ACM, 2009. http://doi.acm.org/10.1145/1557019.1557108.
  55. Wang, Fei, Jimeng Sun, Tao Li, and Nikos Anerousis. “Two Heads Better Than One: Metric+Active Learning and Its Applications for IT Service Classification.” In ICDM 2009, The Ninth IEEE International Conference on Data Mining, Miami, Florida, USA, 6-9 December 2009, 1022–27. IEEE Computer Society, 2009. http://doi.ieeecomputersociety.org/10.1109/ICDM.2009.103.
  56. Boutsidis, Christos, Jimeng Sun, and Nikos Anerousis. “Clustered Subset Selection and Its Applications on It Service Metrics.” In Proceedings of the 17th ACM Conference on Information and Knowledge Management, CIKM 2008, Napa Valley, California, USA, October 26-30, 2008, edited by James G. Shanahan, Sihem Amer-Yahia, Ioana Manolescu, Yi Zhang, David A. Evans, Aleksander Kolcz, Key-Sun Choi, and Abdur Chowdhury, 599–608. ACM, 2008. http://doi.acm.org/10.1145/1458082.1458162.
  57. Kolda, Tamara G., and Jimeng Sun. “Scalable Tensor Decompositions for Multi-Aspect Data Mining.” In Proceedings of the 8th IEEE International Conference on Data Mining (ICDM 2008), December 15-19, 2008, Pisa, Italy, 363–72. IEEE Computer Society, 2008. http://doi.ieeecomputersociety.org/10.1109/ICDM.2008.89.
  58. Papadimitriou, Spiros, and Jimeng Sun. “DisCo: Distributed Co-Clustering with Map-Reduce: A Case Study towards Petabyte-Scale End-to-End Mining.” In Proceedings of the 8th IEEE International Conference on Data Mining (ICDM 2008), December 15-19, 2008, Pisa, Italy, 512–21. IEEE Computer Society, 2008. http://doi.ieeecomputersociety.org/10.1109/ICDM.2008.142.
  59. Papadimitriou, Spiros, Jimeng Sun, Christos Faloutsos, and Philip S. Yu. “Hierarchical, Parameter-Free Community Discovery.” In Machine Learning and Knowledge Discovery in Databases, European Conference, ECML/PKDD 2008, Antwerp, Belgium, September 15-19, 2008, Proceedings, Part II, edited by Walter Daelemans, Bart Goethals, and Katharina Morik, 5212:170–87. Lecture Notes in Computer Science. Springer, 2008. doi:10.1007/978-3-540-87481-2_12.
  60. Qu, Huiming, Jimeng Sun, and Hani Jamjoom. “SCOOP: Automated Social Recommendation in Enterprise Process Management.” In 2008 IEEE International Conference on Services Computing (SCC 2008), 8-11 July 2008, Honolulu, Hawaii, USA, 101–8. IEEE Computer Society, 2008. http://doi.ieeecomputersociety.org/10.1109/SCC.2008.153.
  61. Sun, Jimeng, Charalampos E. Tsourakakis, Evan Hoke, Christos Faloutsos, and Tina Eliassi-Rad. “Two Heads Better Than One: Pattern Discovery in Time-Evolving Multi-Aspect Data.” In Machine Learning and Knowledge Discovery in Databases, European Conference, ECML/PKDD 2008, Antwerp, Belgium, September 15-19, 2008, 5211-22. Lecture Notes in Computer Science. Springer, 2008. doi:10.1007/978-3-540-87479-9_19.
  62. Tao, Dacheng, Jimeng Sun, Jialie Shen, Xindong Wu, Xuelong Li, Stephen J. Maybank, and Christos Faloutsos. “Bayesian Tensor Analysis.” In Proceedings of the International Joint Conference on Neural Networks, IJCNN 2008, Part of the IEEE World Congress on Computational Intelligence, WCCI 2008, Hong Kong, China, June 1-6, 2008, 1402–9. IEEE, 2008. doi:10.1109/IJCNN.2008.4633981.
  63. Tong, Hanghang, Spiros Papadimitriou, Jimeng Sun, Philip S. Yu, and Christos Faloutsos. “Colibri: Fast Mining of Large Static and Dynamic Graphs.” In Proceedings of the 14th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, Las Vegas, Nevada, USA, August 24-27, 2008, 686–94. ACM, 2008. http://doi.acm.org/10.1145/1401890.1401973.
  64. Li, Feifei, Jimeng Sun, Spiros Papadimitriou, George A. Mihaila, and Ioana Stanoi. “Hiding in the Crowd: Privacy Preservation on Evolving Streams through Correlation Tracking.” In Proceedings of the 23rd International Conference on Data Engineering, ICDE 2007, The Marmara Hotel, Istanbul, Turkey, April 15-20, 2007, 686–95. IEEE, 2007. http://doi.ieeecomputersociety.org/10.1109/ICDE.2007.367914.
  65. Sun, Jimeng, Christos Faloutsos, Spiros Papadimitriou, and Philip S. Yu. “GraphScope: Parameter-Free Mining of Large Time-Evolving Graphs.” In Proceedings of the 13th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, San Jose, California, USA, August 12-15, 2007, 687–96. ACM, 2007. http://doi.acm.org/10.1145/1281192.1281266 [presentation, code]
  66. Sun, Jimeng, Yinglian Xie, Hui Zhang, and Christos Faloutsos. “Less Is More: Compact Matrix Decomposition for Large Sparse Graphs.” In Proceedings of the Seventh SIAM International Conference on Data Mining, April 26-28, 2007, Minneapolis, Minnesota, USA, 366–77. SIAM, 2007. doi:10.1137/1.9781611972771.33.
  67. Tao, Dacheng, Jimeng Sun, Xindong Wu, Xuelong Li, Jialie Shen, Stephen J. Maybank, and Christos Faloutsos. “Probabilistic Tensor Analysis with Akaike and Bayesian Information Criteria.” In Neural Information Processing, 14th International Conference, ICONIP 2007, Kitakyushu, Japan, November 13-16, 2007, 4984:791–801. Lecture Notes in Computer Science. Springer, 2007. doi:10.1007/978-3-540-69158-7_82.
  68. Wei, Xing, Jimeng Sun, and Xuerui Wang. “Dynamic Mixture Models for Multiple Time-Series.” In IJCAI 2007, Proceedings of the 20th International Joint Conference on Artificial Intelligence, Hyderabad, India, January 6-12, 2007, 2909–14, 2007. http://dli.iiit.ac.in/ijcai/IJCAI-2007/PDF/IJCAI07-468.pdf.
  69. Hoke, Evan, Jimeng Sun, and Christos Faloutsos. “InteMon: Intelligent System Monitoring on Large Clusters.” In Proceedings of the 32nd International Conference on Very Large Data Bases, Seoul, Korea, September 12-15, 2006, 1239–42. ACM, 2006. http://www.vldb.org/conf/2006/p1239-hoke.pdf.
  70. Papadimitriou, Spiros, Jimeng Sun, and Philip S. Yu. “Local Correlation Tracking in Time Series.” In Proceedings of the 6th IEEE International Conference on Data Mining (ICDM 2006), 18-22 December 2006, Hong Kong, China, 456–65. IEEE Computer Society, 2006. http://doi.ieeecomputersociety.org/10.1109/ICDM.2006.99.
  71. Sun, Jimeng, Evan Hoke, John D. Strunk, Gregory R. Ganger, and Christos Faloutsos. “Intelligent System Monitoring on Large Clusters.” In Proceedings of the 3rd Workshop on Data Management for Sensor Networks, in Conjunction with VLDB, DMSN 2006, Seoul, Korea, September 11, 2006, 47–52. ACM International Conference Proceeding Series. ACM, 2006. http://doi.acm.org/10.1145/1315903.1315914.
  72. Sun, Jimeng, Spiros Papadimitriou, and Christos Faloutsos. “Distributed Pattern Discovery in Multiple Streams.” In Advances in Knowledge Discovery and Data Mining, 10th Pacific-Asia Conference, PAKDD 2006, Singapore, April 9-12, 2006, Proceedings, 3918:713–18. Lecture Notes in Computer Science. Springer, 2006. doi:10.1007/11731139_82.
  73. Sun, Jimeng, Spiros Papadimitriou, and Philip S. Yu. “Window-Based Tensor Analysis on High-Dimensional and Multi-Aspect Streams.” In Proceedings of the 6th IEEE International Conference on Data Mining (ICDM 2006), 18-22 December 2006, Hong Kong, China, 1076–80. IEEE Computer Society, 2006. http://doi.ieeecomputersociety.org/10.1109/ICDM.2006.169.
  74. Sun, Jimeng, Dacheng Tao, and Christos Faloutsos. “Beyond Streams and Graphs: Dynamic Tensor Analysis.” In Proceedings of the Twelfth ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, Philadelphia, PA, USA, August 20-23, 2006, 374–83. ACM, 2006. http://doi.acm.org/10.1145/1150402.1150445.
  75. Papadimitriou, Spiros, Jimeng Sun, and Christos Faloutsos. “Streaming Pattern Discovery in Multiple Time-Series.” In Proceedings of the 31st International Conference on Very Large Data Bases, Trondheim, Norway, August 30 - September 2, 2005, 697–708. ACM, 2005. http://www.vldb2005.org/program/paper/thu/p697-papadimitriou.pdf.
  76. Sun, Jimeng, Spiros Papadimitriou, and Christos Faloutsos. “Online Latent Variable Detection in Sensor Networks.” In Proceedings of the 21st International Conference on Data Engineering, ICDE 2005, 5-8 April 2005, Tokyo, Japan, 1126–27. IEEE Computer Society, 2005. http://doi.ieeecomputersociety.org/10.1109/ICDE.2005.100.
  77. Sun, Jimeng, Huiming Qu, Deepayan Chakrabarti, and Christos Faloutsos. “Neighborhood Formation and Anomaly Detection in Bipartite Graphs.” In Proceedings of the 5th IEEE International Conference on Data Mining (ICDM 2005), 27-30 November 2005, Houston, Texas, USA, 418–25. IEEE Computer Society, 2005. http://doi.ieeecomputersociety.org/10.1109/ICDM.2005.103.
  78. Sun, Jimeng, Dimitris Papadias, Yufei Tao, and Bin Liu. “Querying about the Past, the Present, and the Future in Spatio-Temporal.” In Proceedings of the 20th International Conference on Data Engineering, ICDE 2004, 30 March - 2 April 2004, Boston, MA, USA, 202–13. IEEE Computer Society, 2004. http://doi.ieeecomputersociety.org/10.1109/ICDE.2004.1319997.
  79. Tao, Yufei, Dimitris Papadias, and Jimeng Sun. “The TPR*-Tree: An Optimized Spatio-Temporal Access Method for Predictive Queries.” In VLDB, 790–801, 2003. http://www.vldb.org/conf/2003/papers/S24P01.pdf.
  80. Tao, Yufei, Jimeng Sun, and Dimitris Papadias. “Selectivity Estimation for Predictive Spatio-Temporal Queries.” In Proceedings of the 19th International Conference on Data Engineering, March 5-8, 2003, Bangalore, India, 417–28. IEEE Computer Society, 2003. http://doi.ieeecomputersociety.org/10.1109/ICDE.2003.1260810.

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